Beautiful morning in #Genevallovesdata and now I’m ready for #ECCB2026!

#TalentsCNRS 🏅 Le CNRS décerne ses médailles de cristal et cristal collectif 2026, récompensant des femmes et des hommes ayant contribué à l’avancée des savoirs et à l’excellence de la recherche française. Félicitations 👏 👉 www.cnrs.fr/fr/actualite... 👉 www.cnrs.fr/fr/actualite...

📢 #BSCSeminar: “Machine learning-driven modeling of B and T cells receptors”. 🗣 Maria Rodriguez Martinez, Yale School of Medicine, Yale Center for Systems and Engineering Immunology. 📆 09 July ➡️ bsc.es/45n #EquityinBSC #WomeninBSC @sommalliance.bsky.social

Join our lab to study transcriptional regulation in mouse germ cells and embryonic stem cells at @haskoliislands.bsky.social in beautiful Reykjavík! Apply here: tinyurl.com/mryvhdwj #epigenetics #TranscriptionFactors #transcriptomics #stemCells #pluripotency

Rare diseases are hard to diagnose. Data sharing is changing that. Sharing genomic and clinical data through DECIPHER helps clinicians identify rare conditions faster, advance research and provide answers to families. www.embl.org/news/science... #rarediseases

I am so honoured to receive this prestigious distinction from #ISCB. 🥰 Thank you so much 🙏

ISCB News@iscb.bsky.social · 5mo ago

🌟 ISCB proudly congratulates the 2026 Class of Fellows! 🌟 This prestigious recognition celebrates a career of significant impact and dedication to the #computationalbiology community.  ➡️Read more about this year’s Fellows and their contributions here: https://tinyurl.com/mtuf6m5b

We’re recruiting new Research Group Leaders! Why join? 🌍Work across EMBL’s 6 sites 🎓Participate in @embl.org courses and seminars 🔬Lead discovery-driven research in a collaborative environment Apply by 11 April: embl.wd103.myworkdayjobs.com/en-US/EMBL/j... #ResearchCareers @epetsalaki.bsky.social

Join us at Cell Symposia: Single-Cell Biology in the Era of AI (Dec 2–4, 2026, Munich) 🇩🇪 From multi-omics to AI-driven models of cellular dynamics — an exciting lineup across experimental & computational biology. Hope to see you there! 🔗 www.cell-symposia.com/single-cell-...

Home – Cell Symposia: Decoding Cellular Complexity: Single Cell Biology in the Era of AI

Cell Symposia: Decoding Cellular Complexity: Single Cell Biology in the Era of AI

cell-symposia.com

We’re hiring: Research Group Leader in computational biology. Are you generating more research ideas than you can explore? Lead cutting-edge AI & biology research at EMBL-EBI. Apply by 11 April 2026: embl.wd103.myworkdayjobs.com/en-US/EMBL/j... #ScienceCareers @ewaldlab.org @embl.org

🎉 Fin du GDR Organoïdes… et début du Réseau Thématique Organoïdes #RTO ! Notre objectif : renforcer la structuration nationale autour des organoïdes! 👥 Co-pilotage : @ferrandlab.bsky.social @inserm.fr @Vincent Flacher @cnrs.fr #organoids #organoïdes #RIBBON #biobanks #training #ethics #research ❤️🔬

PhD position in my team at @pasteur.fr ! The selected canddiate will work on the development of new methods combining biophysicial and machine learning modelling for single-cell multi-omics spatiotemporal data. emploi.cnrs.fr/Offres/Docto...

We are hiring for group leaders again — EBI is a great place to start your research group! embl.wd103.myworkdayjobs.com/EMBL/job/Hin...

Research Group Leader

Do you want to lead groundbreaking research in computational biology? Join us at EMBL-EBI! EMBL's European Bioinformatics Institute (EMBL-EBI) is seeking talented and highly-motivated scientists to jo...

embl.wd103.myworkdayjobs.com

New preprint from my team! led by @remitrimbour.bsky.social in collaboration with the @saezlab.bsky.social, we developped ReCoN a new method to model multicellular coordination and its underlying molecular mechanisms. 📜 Paper: lnkd.in/eJ8SfFNH 💻 Code: lnkd.in/e-qx2iNp

Two postdoc positions opened in my team @pasteur.fr in Paris on the development of machine learning methods for single-cell multi-omics spatiotemporal data. See the announcement for all details emploi.cnrs.fr/Offres/CDD/U...

📌 Appel à propositions pour les mini-#symposia à #JOBIM2026 📅 #JOBIM aura lieu à Strasbourg du 30/06 au 3/07/26 ℹ️ Sessions thématiques afin de favoriser les échanges autour de sujets émergents, interdisciplinaires ou particulièrement dynamiques en #bioinformatique et #biologie #computationnelle

📣 The call for tutorials & workshops at #ECCB2026 is now open! Share your tools, methods or expertise with the community. 🗓️ Deadline: 5 January 2026 👉 Submit: tinyurl.com/tw-eccb26 💡 ECCB will take place on 31 Aug–4 Sept in Geneva, gathering 1,000+ scientists from academia, industry, & healthcare.

Very excited to share our latest paper, in which we developed an approach to answer a central question: Is cell fate more dependent on a cell lineage or a cell direct neighbors? Surprisingly, when analyzing single cell trajectories, we showed that C. elegans exhibit both

🚀 That’s a wrap on ERDERA’s 2nd General Assembly! Three inspiring days of scientific exchange, strategy & collaboration — advancing research & innovation in the rare disease ecosystem. Huge thanks to Amsterdam UMC for hosting and to all partners for their energy & commitment! 💡 #ERDERA

"Supercomputación para desarrollar fármacos y predecir enfermedades" en Cinco Días. 💻🧬El BSC intenta resolver algunos de los grandes desafíos médicos. Su departamento de Ciencias de la Vida trabaja en #cáncer, patologías raras, nuevos fármacos o análisis genómico.

RECOMB 2026 website is up! RECOMB will be in Greece :). recomb.org/recomb2026/ --- no paper deadline yet though...

This work was motivated by settings with scarce data such as rare diseases. It turned into multi-dimensional puzzles and alignement problems that we really enjoyed solving! Congrats to Daniel Lepe-Soltero, the postdoc who led this work. Link -> arxiv.org/abs/2503.18856

MODIS: Multi-Omics Data Integration for Small and unpaired datasets

An important objective in computational biology is the efficient integration of multi-omics data. The task of integration comes with challenges: multi-omics data are most often unpaired (requiring dia...

arxiv.org

Very happy to share MODIS - a new Multi-Omics Data Integration method for Small and unpaired datasets! We solve a long-standing problem in the field: how to perform data integration for small unpaired datasets Our solution: learning with class imbalance on both reference and target datasets!

Link to the preprint -> www.biorxiv.org/content/10.1...

jsPCA: fast, scalable, and interpretable identification of spatial domains and variable genes across multi-slice and multi-sample spatial transcriptomics data

Spatially structured cell heterogeneity within tissues is essential for healthy organ function. This heterogeneity is reflected by differential gene expression activity at various spatial location. Sp...

biorxiv.org

Very happy to introduce jsPCA, a fast and interpretable computational framework for spatial transcriptomics that simultaneously identifies spatial domains and variable genes across multi-slice and multi-sample data.

Excited to share David Hirst's PhD work! 🧬 When you only have a few datasets available for multi-omics integration, for instance because you work on rare diseases, one solution is Transfer Learning. Introducing #MOTL - now available in Genome Biology! doi.org/10.1186/s130...

MOTL: enhancing multi-omics matrix factorization with transfer learning - Genome Biology

Joint matrix factorization is popular for extracting lower dimensional representations of multi-omics data but loses effectiveness with limited samples. Addressing this limitation, we introduce MOTL (...

link.springer.com

🚨 We're hiring! NCMBM @ncmbm.bsky.social is looking for 2 new group leaders to join our vibrant research community. Ready to build your own group with strong support and a solid startup package? Interested and attending #ISMBECCB2025? Let’s connect! 🔗 www.jobbnorge.no/en/available...

Group Leader (282908) | University of Oslo

Job title: Group Leader (282908), Employer: University of Oslo, Deadline: Monday, September 8, 2025

jobbnorge.no

👋 We wrap up our #NetBio track 2025 with announcing the #Cytoscape network visualization competition winners (woobox.com/b9poce) Congrats: 1: Alejandra Paulina Perez Gonzalez 2. Michael Costanzo 3. Jong Chan Lim 👏👏👏 Exciting to have Alejandra and Jong in the audience and congrats to Michael!

NetBio Cytoscape Visualization Competition

woobox.com

🎉 And now it is time to introduce our last and shared keynote with the Microbiome COSI: @fionabrinkman.bsky.social is talking about "Microbiome multitudes and metadata madness" connecting the #Microbiome and #NetworkBiology communities! #ISMBECCB2025

✨ And it's already time for the last selected #NetBio talk! Piotr Sliwa is presenting "Multilayer Networks Identify Clinically Relevant Patient Endotypes in COVID-19 and Sepsis" #ISMBECCB2025 #NetworkBiology

#NetBio talks are continuing in room 1B: Dongmin Bang is presenting his proceeding paper on "MixingDTA: Improved Drug-Target Affinity Prediction by Extending Mixup with Guilt-By-Association" doi.org/10.1093/bioi... #ISMBECCB2025 #NetworkBiology