Gabriel Aughey

@gabrielaughey.bsky.social

Neurobiologist at UCL. Interested in neurological disease, genetics, behaviour, and development.

Doing the periodic cleaning of used plasmid miniprep columns and realized in honor of Earth Day it may be worth reminding you molecular biologists: Plasmid miniprep columns can be cleaned and reused essentially indefinitely! Just add 1 M HCl, soak overnight and wash 3x w/ water. Save $ and plastic

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Am I reading this correctly that normal applicant-led @ukri.org grants will be decided by interview? Peer-review is not mentioned, so is it only the panel that decides? Not sure how this is a better system for anyone involved, but we still need clearer communications... www.ukri.org/news/mrc-cur...

MRC curiosity-driven research reopens with new approach

The Medical Research Council (MRC) unpauses curiosity driven research funding and improves the funding process.

ukri.org

Started my fellowship in January - just gearing up to submit my first independent grant and everything has been cancelled! This letter provides no reassurance for ECRs in my position. And why was there no consulation or warning that this was going to happen!? www.ukri.org/news/open-le...

Open letter from Ian Chapman to research and innovation community

UKRI Chief Executive outlines changes to UKRI investment approach, addressing concerns about research funding and the financial position of STFC.

ukri.org

Does anyone have a protocol for homebrew HCR in situ probes? I've seen several published protocols for designing inititators to use with molecular instruments amplifiers - but it looks like they wont share their sequences anymore!?

Always shocking to see these kinds of data collected together. "[publishers made]US$12 billion in profits between 2019 and 2024" - That's $12 billion diverted away from actual research or materially supporting the community - these are disgusting numbers.

Mark A. Hanson@hansonmark.bsky.social · 9mo ago

We wrote the Strain on scientific publishing to highlight the problems of time & trust. With a fantastic group of co-authors, we present The Drain of Scientific Publishing: a 🧵 1/n Drain: arxiv.org/abs/2511.04820 Strain: direct.mit.edu/qss/article/... Oligopoly: direct.mit.edu/qss/article/...

A table showing profit margins of major publishers. A snippet of text related to this table is below.

1. The four-fold drain
1.1 Money
Currently, academic publishing is dominated by profit-oriented, multinational companies for
whom scientific knowledge is a commodity to be sold back to the academic community who
created it. The dominant four are Elsevier, Springer Nature, Wiley and Taylor & Francis,
which collectively generated over US$7.1 billion in revenue from journal publishing in 2024
alone, and over US$12 billion in profits between 2019 and 2024 (Table 1A). Their profit
margins have always been over 30% in the last five years, and for the largest publisher
(Elsevier) always over 37%.
Against many comparators, across many sectors, scientific publishing is one of the most
consistently profitable industries (Table S1). These financial arrangements make a substantial
difference to science budgets. In 2024, 46% of Elsevier revenues and 53% of Taylor &
Francis revenues were generated in North America, meaning that North American
researchers were charged over US$2.27 billion by just two for-profit publishers. The
Canadian research councils and the US National Science Foundation were allocated US$9.3
billion in that year.

Really confused about what problem LLMs like qed are meant to be solving? Is it meant to be for people writing papers - in which case we already have well established mechanisms for feedback (i.e. speaking with human colleagues), or for reviewers - obviously problematic for so many reasons!?

We currently have a call for support that has gone out to European labs, to support FlyBase-UK. We are asking our colleagues from labs in the US and other countries to wait for a similar call to them that will go out in the near future, to support the US sites. We thank you for your patience.

Mark A. Hanson@hansonmark.bsky.social · last yr.

URGENT: FlyBase has lost practically all its funding overnight; even user fees are tied up in denied grant funding. 🤬🤯 Any lab using @flybase.bsky.social please donate using the link in post below. This incredible community, on whose backs our #Drosophila labs depend, can't be left out to dry.

SUSTAINABILITY & #DROSOPHILA - If you keep flies & have tried to re-use containers but then given up on it, please could you let us know & tell us the reasons? We urgently need statements for a publication about sustainability in fly labs. Please, contact Andreas.Prokop@manchester.ac.uk

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New preprint! We have discovered that the splicing factor Sex lethal (Sxl - well known for its role in sex determination) binds to chromatin and regulates tRNA synthesis in neurons by interacting with RNA Pol III! Highlighting Sxl as a novel modulator of neuronal homeostasis. tinyurl.com/s44s2z95

Sex-lethal is recruited to chromatin to promote neuronal tRNA synthesis in males through RNA Polymerase III regulation

The RNA-binding protein Sex-lethal (Sxl) is classically known as a master regulator of sex determination and mRNA splicing in Drosophila melanogaster. However, this role is not conserved across specie...

tinyurl.com

Pedestrians killed by car drivers in UK annually: >400 Cyclists killed by car drivers in UK annually: >100 Pedestrians killed by cyclists in UK annually: <3 So which of these is the most scary and worthy of more laws? www.theguardian.com/news/2025/ap...

Cyclists who kill pedestrians could be jailed for life under new law in England and Wales

Reckless cycling is currently prosecuted under legislation from the 1860s, with a maximum two-year jail sentence

theguardian.com

To me, a Nazi salute means, "I want to murder your family." There can be no irony about it: It puts deep anger and hatred in my heart to see it done and I will never forgive anyone who justifies or minimizes it.

I've been a bit slow to post about this, but our work on RBL2-linked disease is now available online in #Brain. We provide a comprehensive characterisation of clinical phenotypes, and explore the neurological function of the #Drosophila orthologue, Rbf. (1/2) doi.org/10.1093/brai...

Clinical and genetic characterization of a progressive RBL2-associated neurodevelopmental disorder

RBL2 dysfunction, which disrupts cell-cycle gene expression, has been linked to a severe neurodevelopmental disorder. Aughey et al. characterize a cohort o

doi.org

Bird nests made from anti-bird spikes?! 🤯 Hi, I'm a nest researcher 👋 and new here on BlueSky, sharing the craziest #bird nests I've ever found. 👀 Today, I’m sharing my discovery of rebellious birds that build nests out of anti-bird spikes. And honestly, it's like telling a joke... A thread. 🧵

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If anyone happens to need it this week for...reasons...this is the best graphic on the complexity of human sex determination I've ever seen. I use it in an undergrad course on gene regulatory mechanisms. Shoutout to @unamandita.bsky.social! www.scientificamerican.com/article/beyo...

Beyond XX and XY: The Extraordinary Complexity of Sex Determination

A host of factors figure into whether someone is female, male or somewhere in between

scientificamerican.com

We're hiring a postdoc! Please forward to people you know who are looking for positions. Interested in studying how metabolism is wired to support fertility? 🔬🪰 Come join us! Ad to go live next week, but informal enquiries encouraged.

Our new preprint is out - please share! We asked: How can we make CRISPR knockouts in vivo more efficient? And set up an assay that enables detection of CRISPR cutting with 100s-1000s of sgRNAs over entire chromosome arms in living animals. Grab a ☕ and let’s dive in. 🧵🧪 1/n #CRISPR #geneediting