Holiday reading alert! A new paper from the Strynadka lab shows the Cryo-EM structure of the peptide transporter PmtCD. Micelles, nanodiscs and peptidiscs, oh my! www.nature.com/articles/s42... #CryoEM

Cryo-EM analysis of the Staphylococcus aureus phenol-soluble modulin exporter PmtCD apo form in detergent micelles, nanodiscs and peptidiscs - Communications Biology

High-resolution cryo-EM structures of S. aureus ABC transporter PmtCD in apo and ADP-bound states in multiple membrane mimetics define a large intramembrane lumen, adding insight to the export of viru...

nature.com

More structural biology! From the @jburkevic.bsky.social lab with work from @sushantsuresh.bsky.social and @alexlouiseshaw.bsky.social - featuring data collected in our facility! #cryoEM www.jbc.org/article/S002...

Development of an inhibitory TTC7B selective nanobody that blocks EFR3 recruitment of PI4KA

Phosphatidylinositol 4 kinase IIIα (PI4KIIIα/PI4KA) is an essential lipid kinase that plays a critical role in regulating plasma membrane identity. PI4KA is primarily recruited to the plasma membrane ...

jbc.org

Final part of my PhD work is now out! We were able to develop a nanobody that inhibits EFR3 mediated PI4KA membrane recruitment. Potential therapeutic idea? Amazing collaboration with different labs using a host of different techniques. @alexlouiseshaw.bsky.social

John Burke@jburkevic.bsky.social · 9mo ago

Cool new paper (www.jbc.org/article/S002... from my lab spearheaded by graduate students Sushant @sushantsuresh.bsky.social and Alex @alexlouiseshaw.bsky.social . This was a very cool collaboration with the Scott Hansen, Jennifer Cobb, Tamas Balla labs

New preprint from the lab headed up by @sushantsuresh.bsky.social! Late last year, we published the molecular basis of PI4KA plasma membrane recruitment by EFR3 (PMID:39705356). This work builds on these findings and identifies a new potential therapeutic avenue! Check it out!

bioRxivpreprint@biorxivpreprint.bsky.social · last yr.

Development of an inhibitory TTC7B selective nanobody that blocks EFR3 recruitment of PI4KA https://www.biorxiv.org/content/10.1101/2025.07.28.667261v1

Cool new paper (www.jbc.org/article/S002... from my lab spearheaded by graduate students Sushant @sushantsuresh.bsky.social and Alex @alexlouiseshaw.bsky.social . This was a very cool collaboration with the Scott Hansen, Jennifer Cobb, Tamas Balla labs

Thanks to the UBC media team for coverage of our statin : RyR1 work. Atorvastatins bind and trigger opening of a calcium release channel critical for muscle contraction. news.ubc.ca/2025/11/ubc-... @ubcmedicine.bsky.social

UBC researchers uncover how statins harm muscles—and how to stop it  - UBC News

Study reveals how cholesterol-lowering drugs can trigger muscle damage—and point to a way to make them safer.

news.ubc.ca

Congratulations to @filipvanpetegem.bsky.social on their latest paper- with a structure of ryanadine receptor bound to statins! #cryoEM www.nature.com/articles/s41...

Our latest work : Statins are used to lower plasma cholesterol but often come with muscle-related side effects. Using cryo-EM, we show how multiple statin molecules cooperate to bind RyR1, a calcium release channel mainly found in skeletal muscle. nature.com/articles/s41...

Check out this paper, for which we collected data for Rashmi Panigrahi and the Glover lab at UAlberta! We needed a tilted collection to get the side views of these nucleosomes, and it was a lot of fun working with our colleagues from another province! pubmed.ncbi.nlm.nih.gov/41123210/ #cryoEM ❄️🔬🇨🇦

Structural insights into γH2Ax containing nucleosomes - PubMed

The phosphorylation of the histone variant H2AX on the nucleosome, yielding γH2AX, acts as a 'master control switch', signaling the recruitment of DNA repair factors at DNA double-stranded break sites. This phosphorylation is recognized by BRCA1 carboxy-terminal (BRCT) domains of specific repair pro …

pubmed.ncbi.nlm.nih.gov

We are excited to share the recent paper from @filipvanpetegem.bsky.social featuring cryo-EM structures of the KCNQ1 potassium channel collected at HRMEM! #cryoEM #structuralbiology www.nature.com/articles/s41...

Our cryo-EM structure of the intermediate state of the KCNQ1 potassium channel is out. Collaborative effort with the David Fedida and Luca Maragliano labs. Cryo-EM work spearheaded by Efthimios Kyriakis, PhD www.nature.com/articles/s41...

HRMEM is excited to share this new paper from the Cullis lab! Congrats to Miffy Cheng et al! www.nature.com/articles/s41...

Liposomal lipid nanoparticles for extrahepatic delivery of mRNA - Nature Communications

Long-circulating, transfection-competent LNP-mRNA systems are key for effective extrahepatic delivery. Here, authors show that LNPs with high bilayer lipid ratios yield high mRNA encapsulation, prolon...

nature.com

HRMEM is excited to spotlight this excellent review of cell envelope diversity and evolution from HRMEM cryoET user Eltiza Tocheva (@elitzatocheva.bsky.social‬) and team. www.nature.com/articles/s41...

Cell envelope diversity and evolution across the bacterial tree of life - Nature Microbiology

This Review discusses the diversity of cell envelope architectures across major bacterial phyla and highlights conserved features found in diderm lineages.

nature.com

HRMEM is happy to spotlight this exciting work, which applied a magnetic separation technique to characterize LNP bimolecular coronas. Congratulations to Valentina Francia, Yao Zhang and colleagues from the Cullis lab at UBC. We are proud to have supported this work! 🔬 doi.org/10.1073/pnas...

A magnetic separation method for isolating and characterizing the biomolecular corona of lipid nanoparticles | PNAS

Lipid nanoparticle (LNP) formulations are a proven method for the delivery of nucleic acids for gene therapy as exemplified by the worldwide rollou...

pnas.org

In case you missed our May webinar, it is now available!! Ellen Zhong from Princeton University presented CryoDRGN-AI. Topic: CryoDRGN-AI: Neural ab initio reconstruction of challenging cryo-EM and cryo-ET datasets Host: Pete Meyer Recorded on: May 20, 2025 buff.ly/jKjWTOa #SBGridWebinars

CryoDRGN

SBGrid webinars are hosted with partial support from the NIH R25 Continuing Education for Structural Biology Mentors #GM151273, in collaboration with Co-PI J...

youtu.be

HRMEM is proud to spotlight this structure of the cardiac potassium channel, KCNQ1, bound to its activator, ML277! Shout to Katrien Willegems, Jodene Eldstrom, Efthimios Kyriakis, Fariba Ataei and researchers from the Fedida and Van Petegem Labs at UBC! 🔬🫀🧬 #cryoEM www.nature.com/articles/s41...

Structural and electrophysiological basis for the modulation of KCNQ1 channel currents by ML277 - Nature Communications

KCNQ1 channels are active in heart, brain and gut. Functional loss causes epilepsy and sudden arrhythmic death. Here, authors describe a key activator drug binding site, explaining isoform and drug se...

nature.com

HRMEM is happy to spotlight this structure of calcineurin bound to PI4KA determined by Alexandria Shaw and colleagues from the Burke Lab at the University of Victoria and the Yip Lab at UBC! We are proud to have provided the electron microscopy for this work! Read more: doi.org/10.1016/j.st...

Structure of calcineurin bound to PI4KA reveals dual interface in both PI4KA and FAM126A

Phosphatidylinositol 4-kinase alpha (PI4KA) maintains the phosphatidylinositol 4-phosphate (PI4P) and phosphatidylserine pools of the plasma membrane.…

sciencedirect.com

Mass Spec + lasers + cryoEM = COOL SCIENCE! New research from @coonlab.bsky.social and the Grant Lab combines mass spec to land proteins on TEM grids, a laser to restore protein structure, and cryoEM imaging and analysis to produce 3D reconstructions. www.mcponline.org/article/S153...

Laser-Induced Rehydration of Cryo-Landed Proteins Restores Native Structure

The use of native mass spectrometry (MS) to land biological molecules for subsequent cryogenic electron microscopy (cryoEM) imaging and three-dimensional reconstruction has gained momentum in recent y...

mcponline.org

Hey #TeamTomo, Ever been in need of a tutorial about the fundamentals of cryo-electron tomography? From preprocessing raw frames to high-res subtomogram averaging? That's why @florentwaltz.bsky.social and I made this website! tomoguide.github.io Follow the thread 1 /🧵 #CryoET #CryoEM 🔬🧪

We are happy to spotlight these structures of human ABCA4, a crucial transporter for ocular function, determined by Jéssica Fernandes Scortecci and colleagues from the Molday and Van Petegem Labs at UBC! 🔬 We are happy to have supported this work! #cryoEM Read more: www.nature.com/articles/s41...

Cryo-EM structures of the ABCA4 importer reveal mechanisms underlying substrate binding and Stargardt disease - Nature Communications

ABCA4 is an ATP-binding cassette (ABC) transporter that flips N-retinylidenephosphatidylethanolamine (N-Ret-PE) to the cytoplasmic leaflet of photoreceptor membranes. ABCA4 mutations are associated wi...

nature.com

Cryo-ET of Thermotoga maritima in a study led by Danielle Sexton and colleagues from the Tocheva Lab at UBC broadened our understanding of outer membrane biogenesis! Shout out to @elitzatocheva.bsky.social ! Read more about this awesome work supported by HRMEM here: www.pnas.org/doi/10.1073/...

The cell envelope of Thermotogae suggests a mechanism for outer membrane biogenesis | PNAS

The presence of a cell membrane is one of the major structural components defining life. Recent phylogenomic analyses have supported the hypothesis...

pnas.org

🚨New preprint!🚨 #teamtomo We expanded Surface Morphometrics to quantify membrane thickness from cryo-ET—revealing local variation across organelles. Led by the lab’s first grad student, @mmedina300kv.bsky.social (defending Monday! 🍾) w/ @attychang.bsky.social @hamid13r.bsky.social & @tomo.science

bioRxivpreprint@biorxivpreprint.bsky.social · last yr.

Surface morphometrics reveals local membrane thickness variation in organellar subcompartments https://www.biorxiv.org/content/10.1101/2025.04.30.651574v1

Bin Zhao and colleagues from the Cullis Lab at UBC have developed a technique to determine the pH inside LNPs using a pH-sensitive fluorescent dye-based DNA probe. 🧬🔬 HRMEM is happy to have supported the electron microscopy for this exciting research! Read more : doi.org/10.1016/j.bi...

Determination of the interior pH of lipid nanoparticles using a pH-sensitive fluorescent dye-based DNA probe

Lipid nanoparticles (LNPs) containing ionizable cationic lipids are proven delivery systems for therapeutic nucleic acids, such as small interfering R…

sciencedirect.com

"Not only will it provide sharper details of proteins and other molecules imaged with cryo-EM," says @berkeleylab.lbl.gov 's Peter Denes, "but it should enable microscopists to image even proteins roughly half the size of what is currently possible."

Ultracool microscopy yields a sharper look at proteins

After years of frustration, researchers learn how to sharpen molecular images with liquid helium

science.org

We are excited to spotlight this structure of the type 3 ryanodine receptor determined by Yu Seby Chen and colleagues from UBC and the University of Siena! It was a pleasure to collaborate with the Van Petegem (@filipvanpetegem.bsky.social) Lab on this lovely work! www.nature.com/articles/s41...

Cryo-EM investigation of ryanodine receptor type 3 - Nature Communications

Ryanodine Receptor type 3 mediates ER Ca2+ release in different cell types. Here, the authors use cryo-EM to reveal a binding site for chloride and two distinct sites for ATP. Epileptic encephalopathy...

nature.com

HRMEM is happy to have supported this structure determination of Rab3GAP by Gage Fairlie, Kha Nguyen and colleagues. Congratulations to the Burke Lab (@jburkevic.bsky.social )at the University of Victoria and the Yip Lab at UBC! 🔬🎉 Read more here: www.nature.com/articles/s41...

Biochemical and structural characterization of Rab3GAP reveals insights into Rab18 nucleotide exchange activity - Nature Communications

Rab3GAP, a guanine nucleotide exchange factor for Rab18, regulates membrane trafficking and lipid droplet metabolism. The authors elucidated its molecular structure, mapped its potential substrate bin...

nature.com

Congratulations to Franco Li, Shaun Peters and colleagues from the Strynadka Lab at UBC for their recent publication showcasing cryo-EM structures of S. aureus TarGH in the presence of targocil-II! HRMEM is proud to have supported this work! 🔬🫶 www.nature.com/articles/s41...

Cryo-EM analyses unveil details of mechanism and targocil-II mediated inhibition of S. aureus WTA transporter TarGH - Nature Communications

Cryo-EM illuminates atomic binding details and far-ranging conformational effects of the inhibitor targocil-II on wall teichoic acid ABC transporter TarGH, a virulence target from the antibiotic resis...

nature.com

People always ask me what resolution they need and I say...depends on the question you're asking. This is a really cool example of that extra resolution being meaningful!

Dominik Hrebik@dhrebik.bsky.social · last yr.

I am very happy to announce that we solved the in-virus #cryoEM structure of the #HIV matrix protein. The structure helped us to resolve a long mystery in HIV biology. A🧵1/5 Read more in Nature: www.nature.com/articles/s41... 🧪

In @justinditrani.bsky.social final postdoc paper (with contributions from many others) we show that forming/purifying vesicles (here from M. smegmatis) allows structure det'n of *endogenous* membrane proteins in their *native lipid bilayer* 🧵 on methods & TB biology... www.pnas.org/doi/full/10....

Millin' like a villain