Bacteriology-Focused Assistant Professor Position in Microbiology and Immunology at the University of Michigan Application deadline: August 15, 2026 Come be my colleague!

📝 NEW PREPRINT It’s with an immense joy that our preprint is finally out and it’s my first first co-author paper!!! 🧬🍄 What is the diversity of 3D genome architectures in fungi? We reconstructed the 3D genome architecture of public Hi-C data from 55 fungal. Preprint: lnkd.in/enxTh2Cm

Exciting news! After a wonderful four years at @uni-jena.de, I'm excited to announce the next chapter as a group leader at @fzborstel.bsky.social and professor at @uni-kiel.de.

Balance of the Microverse@microverse.bsky.social · last mo.

Congratulations to @ameliabarberphd.bsky.social on her next career step! From July 1, she joins @fzborstel.bsky.social & @uni-kiel.de as Group Leader and Professor. We'll miss her interdisciplinary spirit and fungal expertise. Best of luck in Kiel and Borstel, Amelia! 🦠💻

New preprint day!! @laurafabre.bsky.social took 1k RNAseq samples and built an atlas of lncRNAs across four Aspergillus species, expanding the gene content of each by up to 20% and discovering a novel modulator of aflatoxin production. w/ @kellerlab.bsky.social.

Post the best photo you've ever taken of your pet

Jo Rhodes@drjorhodes.com · 4mo ago

Post the best photo you’ve ever taken of your pet

The VEO Group has a position open for a PhD student to investigate Fungi-bacteria interactions in complex communities! Check out this position and many more at the JSMC website 👇👇 www.jsmc-phd.de/admission/va...

The lab of Johannes Zimmermann at Jena University has an opening for a PhD position - exciting research in a highly innovative group: www.jsmc-phd.de/admission/va...

Voici un tout nouveau cycle d'apprentissage : "Construction and analysis of eukaryotic pangenome graphs". Venez apprendre à construire et analyser un graphe de pangénome pendant 2 jours à partir du 30 novembre à 14h. Infos et inscriptions ici : bioinfo.genotoul.fr/index.php/ev...

Construction and analysis of eukaryotic pangenome graphs - genotoul-bioinfo

30/11/2026 - 02/12/2026 @ 14 h 00 - 12 h 00 - This training session is organized by the Genotoul-Bioinfo platform. This 2 days long course is dedicated to the construction and the analysis of eukaryot...

bioinfo.genotoul.fr

Phd Position alert 🚨 Join our project ASTRAfun (Adaptation and Starship Traffic in Root-Associated fungi), in which we will use computational models to unveil the hidden dynamics of fungal evolution. It’s not going to be just regular fun. It’s going to ASTRAfun. 🤓 www.uu.nl/en/organisat...

PhD Position in Computational Modelling of Fungal Evolution

How do giant mobile elements called ‘Starships’ reshape fungal plant pathogens? Help us computationally model their spread and impact in nature and agriculture!

uu.nl

Hey #fungal26 our lab is hiring a postdoctoral researcher for an NSF funded project in ectomycorrhizal competition. Come find me for more info! www.lotuslofgren.com/pd2026

My research exchange at the University of Michigan in Ann Arbor is coming to an end! This stay was possible thanks to the scientist exchange funds grant of @microverse.bsky.social. Here is a thread🧵of thankfulness for my wonderful stay in Michigan!

Do you work with the Aspergillus fumigatus model isolates Af293 or CEA10? If so, we want to collaborate with you! In return for your lab's participation we will sequence your strain for free and provide co-authorship on the final paper. Learn more here: asp-fumi-seq-project-2025.vercel.app

This tool, available as a GNU GPLv3 one, is available here gratools.readthedocs.io/en/latest/ It can extract stats, subgraphs, fasta, count specific nodes and identify specific paths, in an easy and visual way

Now officially published in Current Biology 🥳🥳 @mfseidl.bsky.social @binfutrecht.bsky.social www.cell.com/current-biol...

Extensive horizontal transfer of transposable elements shapes fungal mobilomes

Romeijn et al. reveal that horizontal transposon transfer is widespread in fungi, contributing up to 70% of transposon content in some taxa. The authors uncover thousands of events across diverse line...

cell.com

Josje Romeijn@jromeijn.bsky.social · last yr.

The first paper of my PhD is now available as a preprint! 🎉 Transposable elements (TEs) don't just jump within fungal genomes, they also move extensively between species. In this study, we screened over 1,300 fungal genomes and found a conservative estimate of 5,500+ horizontal transfer events.

Anyone looking for roommates for #Fungal26 in Asilomar? I will participate and I am looking for someone to share a room for the week! I'm a female PhD student, looking to share a room with another female. Please DM me if you'd like to team up with me 😄 Reposts appreciated!

New preprint: 🚀🧬 Starship in the genome of the lichen fungus Xanthoria. Discovery of giant transposons Starships challenged what we thought we knew about fungal genomes. But what about Starships in #lichen fungi? Let us present Tangerine! 🖥️ 🧪 🦠 🧫 #SymbioSky doi.org/10.1101/2025...

Funded PhD position 1/9: Explore RNA modification by natural products across species & benefit from the PhD training program ILRS 2.0. Apply by 13 Dec. 🎓 lmy.de/szeVW #PhDOpportunity #ScienceJobs #LeibnizHKI

Third lab retreat in the books! We once again headed to the city of Eisenach for two days of project presentations, soft skills workshops, and science discussions. We also played the beautiful Mycology board game!

Hi Bluesky community - I'm teaching computational genomics again in the Spring term; always happy to have auditors or folks Zoom in. Just have your students email me for deets.

1/ Ever needed to annotate TEs in a fungal genome, but didn't know where to start? We have released #MycoMobilome, a community-focused non-redundant database of transposable element consensus sequences for the fungal kingdom, constructed from >4,000 fungal genomes! www.biorxiv.org/content/10.1...

📣 I’m excited to share two open positions in my lab @leibniz-hki.de. For this interdisciplinary project with @luziagyr.bsky.social, I’m seeking (1) an enthusiastic PhD student interested in fungal natural product research and genetic engineering, as well as (2) a technical assistant 👇🏻

Congrats to the group's first PhD student, the newly minted Dr. Brassington!! Phillip relocated back to Oceania in the period between submitting his dissertation and his oral defense, so we had to make do with a virtual defense, but I am still incredibly proud of him.

Want to understand how entire fungal chromosomes can be horizontally transferred? Join us to unravel the mechanism/consequences of horizontal chromosome transfer in a fungal pathogen as part of an ERC-funded project. Postdoc/PhD positions available. fungal-evolutionary-genetics.de/open-positio...

Open Positions

ERC-funded project on the mechanism of horizontal transfer of entire fungal chromosomes PhD PostDoc

fungal-evolutionary-genetics.de

Heads up: ignore samtools dot org, similarly minimap2 dot com and likely others. It's owned by a known phishing site and while the binaries they offer look valid currently (but note they may be serving us different binaries to others), that could change. Ie: it's not us (Samtools team)! Be warned

🌱🔥🫁 From compost heaps to human lungs: Understanding how Aspergillus fumigatus has acquired the ability to infect humans Opportunistic fungal pathogens like Aspergillus fumigatus primarily live in the environment, thriving in very diverse ecosystems such as soils and compost heaps.

Just a few more days to apply! ⏰

Amelia Barber@ameliabarberphd.bsky.social · last yr.

My group at is hiring a PhD student to explore how fungal pathogens that live in the environment will adapt their genomes, acquire new phenotypes, and perhaps even increased infectivity as a result of climate change. Please share! More info and applications at @ jobs.uni-jena.de/vrbup

My group at is hiring a PhD student to explore how fungal pathogens that live in the environment will adapt their genomes, acquire new phenotypes, and perhaps even increased infectivity as a result of climate change. Please share! More info and applications at @ jobs.uni-jena.de/vrbup

📣 I’m recruiting a #Postdoc to help us further our understanding on the infection strategies of our human fungal pathogen. If you’re enthusiastic about research, our interdisciplinary group @leibniz-hki.de will be a good fit for you! Please share! jobs.hki-jena.de/jobs/Postdoc...

Job opportunity Postdoctoral Researcher (m/w/div) in “Microbial Infection Strategies” at Leibniz HKI Jobportal

Wissenschaft/Forschung in Jena

jobs.hki-jena.de

We finished this edition with a delightful keynote by Jean Monlong who guided us through his journey about finding SVs in pangenomes #JOBIM2025 👏🏻