🌱Exciting Opportunity! The Jarvis Lab is recruiting a Postdoctoral Research Associate to study the structure and function of the chloroplast-associated protein degradation (CHLORAD) machinery. Application Deadline: 12 noon, 24 November 2026 Apply here: my.corehr.com/pls/uoxrecru...
SPMIR Group 🧫🌿🔬
@spmir.bsky.social
Sensors for Plant–Microbe Interactions and Responses (SPMIR) Group at UMR5240 (Université de Lyon, UCBL, CNRS, INSA Lyon) Lead @mayurisadoine.bsky.social https://spmir-group.academicwebsite.com
Preprint Alert! 🚨 Have you ever wondered how highly conserved molecular complexes adapted to ever changing cellular environments? Thrilled to show our work on 26S proteasome evolution in the green lineage. 🌱🧬👇 www.biorxiv.org/content/10.6... A thread🧵
Gene repertoire expansion and cis-regulatory diversification shaped 26S proteasome evolution within a proteostasis-centered network
The 26S proteasome is essential for proteostasis and constitutes one of the most conserved molecular machineries in eukaryotes. Its homeostasis is maintained by a mechanistically conserved feedback lo...
biorxiv.org
Are plant roots really made up of concentric layers of homogeneous, differentiating cell types? In our new study, out now in @nature.com, we show a more complex picture: two distinct cell states within root lineages, shaped in part by the environment. 🧵👇 www.nature.com/articles/s41...
An environmentally regulated dichotomy in cell lineages of the root - Nature
An environment-regulated state is identified across multiple cell types at the root tip, revealing a shared dichotomy between cells with and without this state.
nature.com
🎉 Welcome to @peraltamanu.bsky.social, who has joined us as a Postdoctoral Research Associate 😊 🔬🌿 Manuel brings expertise in plant biology, functional genomics, and redox signaling to explore plant–microbe interactions. 🔗 Find out more about him👇: spmir-group.academicwebsite.com/people/6678-...
SPMIR Group - Manuel J. Peralta
Originally from Argentina, Manuel holds a PhD in Biological Sciences from the National University of Río Cuarto (UNRC). He brings a rich multidisciplinary ba...
spmir-group.academicwebsite.com
Just for fun: a Python simulation of the slime mould Physarum polycephalum. Tero et al. adaptive transport network with spatial growth, vein formation, obstacles and bacterial prey with inhibitors. Built with Claude (Fable 5.1). Code, GIFs and docs: github.com/davideciccar...
Glad to share our first paper from the first chapter of my Phd about Arabidopsis thaliana interaction with parasitic plant Phelipanche ramosa, which identified glucosinolate as main active pathway but under strigolactone negative regulation : for more 👉 academic.oup.com/plcell/advan...
Arabidopsis thaliana triggers Phelipanche ramosa germination via isothiocyanates under negative strigolactone regulation
Abstract. Parasitic weeds are major agricultural threats through fine-tuned chemical interactions with their hosts. We investigated the germination-stimula
academic.oup.com
Grateful for this new opportunity and an exciting new challenge in my professional career. I’m very happy to be returning to plant biology, especially to the study of plant-microorganism interactions 🥼🌱
🎉 Welcome to @peraltamanu.bsky.social, who has joined us as a Postdoctoral Research Associate 😊 🔬🌿 Manuel brings expertise in plant biology, functional genomics, and redox signaling to explore plant–microbe interactions. 🔗 Find out more about him👇: spmir-group.academicwebsite.com/people/6678-...
🎉 Welcome to @peraltamanu.bsky.social, who has joined us as a Postdoctoral Research Associate 😊 🔬🌿 Manuel brings expertise in plant biology, functional genomics, and redox signaling to explore plant–microbe interactions. 🔗 Find out more about him👇: spmir-group.academicwebsite.com/people/6678-...
SPMIR Group - Manuel J. Peralta
Originally from Argentina, Manuel holds a PhD in Biological Sciences from the National University of Río Cuarto (UNRC). He brings a rich multidisciplinary ba...
spmir-group.academicwebsite.com
Congrats, Yimo, on your first first-author paper! And a big thank you to everyone for the fantastic team effort! Also, a big thank you to Angewandte Chemie Int Ed for providing us with a fantastic platform to showcase our work! doi.org/10.1002/anie...
Gain‐of‐Function Engineering of the NifEN Scaffold Into a Self‐Assembling Nitrogenase
From scaffold to enzyme: Systematic engineering of the cofactor maturation scaffold NifEN reconstructs the P→M electron relay along with cofactor coordination and proton gating at the S2B site, conve....
doi.org
Very nice Spotlight article in @cp-trendscellbio.bsky.social about our recent @cp-molcell.bsky.social article (doi:10.1016/j.molcel.2026.04.004). If you want a summary of our findings and their implications for proteostasis control, please have a read !👇🤓 www.cell.com/trends/cell-...
ER-associated sorting links proteostasis to photosynthesis
Proteotoxic stress challenges multiple organelles, but how plants coordinate proteasome capacity with organellar function remains unclear. Langin et al. reveal that endoplasmic reticulum (ER)-associat...
cell.com
Finally online! Cross-feeding enables robust coexistence between four bacterial species | PNAS www.pnas.org/doi/10.1073/... #microsky
Cross-feeding enables robust coexistence between four bacterial species | PNAS
Resource supply is generally considered a dominant driver of microbial diversity. Here, using a four-species bacterial consortium, we asked whether...
pnas.org
Meet Amandine Achard! Master’s student of the SPMIR group, Amandine explores how bacteriophages interact with the plant pathogen Xanthomonas hortorum pv. vitians using microfluidics and biosensor imaging 🔬 🦠 🧫 Her next step 🎯: a PhD in microbiology! #PlantScience #ECR 👉 shorturl.at/YPQeF
We are pleased to welcome Lydia Hamek to our group, a Master’s student in microbiology who recently joined us. Using real-time biosensor imaging, she studies how pathogens colonize plant hosts 🌱🦠 Her goal 🎯 is to pursue a PhD and a career in research. #PlantScience #ECR 👉 lnkd.in/eKqZFmhH
Happy to share a joint work leaded by Hernan Salinas Grenet between Jose M. Alvarez´lab and my group on "GRNs acting on dual stress Low Pi and Salt stress in roots" using data mining and functional validation. Please take a look here www.biorxiv.org/content/10.6... #roots #multiplestresses
Can transfer RNA (tRNA) genes help reconstruct ~1.5 billion years of photosynthetic evolution? 🌊🦠🏞️🌱 In our new Review in @embojournal.org, we explore what tRNA biology can reveal about endosymbiosis, terrestrialization and the evolution of translation. link.springer.com/article/10.1...
From water to land: evolution of tRNA gene repertoires in photosynthetic organisms - The EMBO Journal
Photosynthetic eukaryotes have undergone evolutionary shifts from aquatic to terrestrial habitats, accompanied by changes in genome organization and gene regulation. Yet, the evolution of transfer RNA...
link.springer.com
Super happy to share with Magali Grison, @yohannboutte.bsky.social and Christel Poujol this amazing method of super-resolution in plant-cell microscopy 🤗 always further ! always more extraordinary !🔬 🪴 @lbm-bordeaux.bsky.social @bic-bordeaux.bsky.social @univbordeaux.bsky.social
Dual Color tau-STED Super Resolution Microscopy in Arabidopsis Root Tip Work by Louise Fougère, Christel Poujol, Yohann Boutté and Magali Grison at Universite de Bordeaux. #LifeSciences #Reproducibility #PlantScience
Meet Amandine Achard! Master’s student of the SPMIR group, Amandine explores how bacteriophages interact with the plant pathogen Xanthomonas hortorum pv. vitians using microfluidics and biosensor imaging 🔬 🦠 🧫 Her next step 🎯: a PhD in microbiology! #PlantScience #ECR 👉 shorturl.at/YPQeF
We are pleased to welcome Lydia Hamek to our group, a Master’s student in microbiology who recently joined us. Using real-time biosensor imaging, she studies how pathogens colonize plant hosts 🌱🦠 Her goal 🎯 is to pursue a PhD and a career in research. #PlantScience #ECR 👉 lnkd.in/eKqZFmhH
New preprint out! We generated haplotype-phased genome assemblies for two poplar rust fungi. These resources open new opportunities to explore rust genome architecture, haplotype diversity, and TE-driven evolution. www.biorxiv.org/content/10.6...
biorxiv.org
Thrilled to share our paper now out in Nature Plants 🎉 We developed a genome-host association (GHA) approach to study pathogen adaptation directly from field metadata by using the originating host cultivar as phenotype. www.nature.com/articles/s41...
Genome–host association mapping reveals wheat pathogen genes involved in host specialization - Nature Plants
This study introduces genome–host association (GHA), leveraging natural epidemics to map the genetic landscape of host adaptation in the pathogen Zymoseptoria tritici. Applied to 832 wheat fungal stra...
nature.com
Imaging of plant–microbe interactions by the SPMIR group 😉 #FluorescentMonday #Microscopy #ScienceIsArt
We are pleased to offer a postdoctoral fellowship opportunity (MSCA-PF 2026) in our group. Interested? Have a look here 👉 shorturl.at/VYGHN
SPMIR Group - Open position(s)
Postdoc Position(s) 1 MSCA Postdoctoral Fellowship 2026 PDF file PhD Position(s) No open positions at this time Master Project (s) No open positions ...
shorturl.at
Imaging of plant–microbe interactions by the SPMIR group 😉 #FluorescentMonday #Microscopy #ScienceIsArt
How does molecular valency shape condensate assembly and function? We used the CO2-fixing organelle in algae—the pyrenoid—to find out… 🧵 Preprint here!: www.biorxiv.org/content/10.6... @cellarchlab.com @phaips.vd.st @biologyatyork.bsky.social #Rubisco #PhaseSeparation #Condensates #Pyrenoid
ONE WEEK to the deadline! #PlantSciJobs #phd #plantsciphd email me jo.a.hepworth@durham.ac.uk for more information (I'm friendly and keen to meet you!) and tips on application documents. www.needl.org.uk
NEEDL - North East of England Doctoral Landscape
The North East of England Doctoral Landscape (NEEDL) is a cutting edge bioscience research training partnership, developing researchers for the future.
needl.org.uk
Pre-weekend reminder to contact me about applying for my #PhD opportunity @durham.ac.uk #PlantSciJobs: www.findaphd.com/phds/project...
Happy New Year from the SPMIR Group! May this year bring you health, joy, and success.
The SPMIR group wishes you a lovely end of 2025 and a happy New Year 2026! May the coming year be full of success and joy for all of you 🥂
Optimizing our plant imaging protocol and having fun along the way 😜
We have done our first @protocolsio.bsky.social. Are you interested about #genome_annotation quality evaluation? We have developed a tool called #GAQET2 (github.com/victorgcb198...) which runs several tools like #AGAT, #BUSCO, and many other tools. You can find it at www.protocols.io/view/structu...
GitHub - victorgcb1987/GAQET2
Contribute to victorgcb1987/GAQET2 development by creating an account on GitHub.
github.com
Bethel Dereje attended with curiosity the 2025 colloquium of the Association Femmes et sciences. This organization that advocates for gender equality in science from preschool all the way to higher education. What an inspiring picture of a talented young scientist full of enthusiasm 🥰