Filipe Carvalho

@ffchcarvalho.bsky.social

Postdoc @ EpiMiC lab (UMR1319 Micalis, INRAE, Jouy-en-Josas 🇨🇵). Previously @ Cossart lab (Institut Pasteur, Paris 🇨🇵), @ Cabanes lab (i3S, Porto 🇵🇹). Molecular microbiology, host-pathogen interactions, bacterial dormancy and environmental persistence

This paper advances deep proteome sequencing, improving detection of protein variants & isoforms beyond standard shotgun proteomics. By analyzing six human cell lines, it identifies a million unique peptides from 17,717 protein groups, highlighting translation of most alternatively spliced isoforms.

Global detection of human variants and isoforms by deep proteome sequencing - Nature Biotechnology

Deep proteome sequencing achieves ~80% coverage of the human proteome.

doi.org