Lots of fun and new ideas from our joint lab retreat near Saint-Jurs with @guignardlab.bsky.social, @axonreg2lab.bsky.social, and @raphclement.bsky.social 🙌🏼☀️🛶
GuignardLab
@guignardlab.bsky.social
Computer Science, Morphogenesis & Variability: From coding algorithms to decoding embryogenesis. https://bsky.app/profile/ibdm.bsky.social Open positions: http://www.guignardlab.com/jobs
How does an ovarian follicle remodel in space and time to release an egg? 💥🥚 We have an exciting PhD project combining follicle culture, advanced imaging and quantitative analysis to understand the cellular dynamics of ovulation. 🔬 Co-supervised by me and @ovarylab.bsky.social. Please share! 🌱
To turn spatial data into a 3D object, check our protocol (open source, napari plug-in). @guignardlab.bsky.social @adrianobolondi.bsky.social @ibdm.bsky.social For example, if you have spatial RNA-seq as sections, you can align them automatically to analyse directly in 3D. bio-protocol.org/e5607
Congratulations @alicegros.bsky.social for this great PhD and thanks a lot for these great years! I’m so glad you were my first PhD student, I really enjoyed our collaboration. I can’t wait to see what you will do next!
Merci infini à ma famille scientifique @pflenne.bsky.social @shamtlili.bsky.social @guignardlab.bsky.social de m'avoir tout-tout-tout appris 💙
Congratulation @alicegros.bsky.social, @jules-vanaret.bsky.social, @dunsingvalentin.bsky.social et al. for this great collaborative work! And thanks you, @shamtlili.bsky.social and @pflenne.bsky.social for this really nice collaboration!
So excited to share my 1st paper !!🌞 Co-authored with @jules-vanaret.bsky.social @dunsingvalentin.bsky.social, we developped an integrated pipeline for imaging, segmenting and analysing cell-scale patterns in gene expression + tissue properties in complex 3D tissues elifesciences.org/reviewed-pre...
Register for #sfbd #devbio #ShapingLife3 meeting in sunny Cassis by the sea. If you like dev biology, join us! speakers include @justinmcrocker.bsky.social @guignardlab.bsky.social @bulutkarslioglu.bsky.social @dudinlab.bsky.social @flowerwhatelse.bsky.social and more @maitrejl.bsky.social
Do you work on cell tracking or with cell tracking? Let's meet at the #MMC2025 conference! We're hosting a Frontiers session on "Tracking in Life Sciences" there. If you're working on cell tracking or any form of biological tracking, this is your chance to share your insights and innovations. 👇
📣Exciting meeting ahead! Join us next June in beautiful Cassis for #ShapingLife3! www.atoutcom.com/shaping-life/ @justinmcrocker.bsky.social @mhverlhac.bsky.social @guignardlab.bsky.social @bulutkarslioglu.bsky.social @dudinlab.bsky.social @flowerwhatelse.bsky.social @sfbd.bsky.social
We just released and uploaded a new version of *Mastodon*, the large-scale tracking and track-editing framework for large, multi-view images. Mastodon is available via Fiji, via a dedicated update site. mastodon.readthedocs.io/en/latest/do... Below is a thread that survey some of the novelties ⏬️
The IBDM is recruiting a new group leader! Come and join us!!
📢 We are recruiting group leaders! We seek researchers who address fundamental questions in biology, including the development, the function, and the dynamics of complex biological systems. APPLY before March 30th 2025 👉 www.ibdm.univ-amu.fr/we-are-recru... #ScienceCareers #Marseille
👉 Registration to #SHAPINGLIFE3 is now open ! This new issue of the French Developmental Biology Society international meeting will be held in the small village of Cassis near Marseille June 3-6 2025. Lots of cool science and paradise location. www.atoutcom.com/shaping-life... @sfbd.bsky.social
REGISTRATION – Shaping Life 3
atoutcom.com
It’s official 🎉 I am excited to share that I will start my lab this spring at the Max Planck Institute for Immunobiology and Epigenetics @mpi-ie.bsky.social in beautiful Freiburg 🤩🗻☀️ I am looking forward to new collaborations and working with the fantastic community in Freiburg & its surroundings!
Openings for PhD studentships at CENTURI, incl a collaborative project with @guignardlab.bsky.social. Apply if you are interested in 3D computational modelling of mouse embryonic processes! More info and online application 👉 centuri-livingsystems.org/application-... @univ-amu.fr @ciml.bsky.social
I wrote some thoughts about why peer review matters It shapes scientific standards, maintains field coherence & trains new researchers Yes, it needs improvement—but it's the glue that holds scientific progress together briscoelab.org/2024/12/11/i...
In Praise of Peer Review
As an Editor of the journal Development, I often hear complaints about peer review. We all know the problems – from lengthy review times to requests for seemingly unnecessary experiments. I a…
briscoelab.org
Discover the winners of the FBI Image Contest 2024🔬 🥇Place: Vanessa Weichselberger (IBDM-Université Aix-Marseille) 🥈Place: Dalia El Arawi (IBDM) 🥉Place: Frédéric Fercoq (Musée National d'Histoire Naturelle-Unité MCAM) 🏆 Congratulations to them! 👏 A big thank you to all the participants!
🎶 🪩 🪩 End of the week #segmented #organoids dancing 🪩 🪩 🎵! By @alicegros.bsky.social 🤗. I really like them!
🎓Looking to pursue a #PhD in the field of #BiomedicalResearch? Join us for a fully-funded #PhDposition! Apply by March 3, 2024 👉 www.mdc-berlin.de/phd #PhDjob #PhDlife #ScienceCareer #mdcBerlin @www.helmholtz.de
🚨🚨Still looking for a postdoc and a PhD for this spectacular project involving computer vision and spatial transcriptomics! Please RT 🙂
📣Join us in Marseille for an exciting postdoc | PhD opportunity at the crossroads of Computer Science and DevBio! Dive into a collaborative HFSP funded project, unravelling embryo bilateral symmetry. 🦐 You are curious and creative: contact us! You know someone: tell them!🤓 www.guignardlab.com/jobs
📣Join us in Marseille for an exciting postdoc | PhD opportunity at the crossroads of Computer Science and DevBio! Dive into a collaborative HFSP funded project, unravelling embryo bilateral symmetry. 🦐 You are curious and creative: contact us! You know someone: tell them!🤓 www.guignardlab.com/jobs