What tools do people recommend for asynchronous comms and coordination for projects spanning multiple countries and institutions? Preferably free/ low cost and a minimal learning curve. I’m hoping there’s something better than Slack and WhatsApp out there…
Caron Jacobs
@caronjacobs.bsky.social
Microscope nerd, cat person, finally made the jump over here. Cape Town, South Africa
All I want for Christmas is microscope users with experimental controls 🎄🧫
#GloBIAS seminar coming up this week. We start the next miniseries on: 'Infrastructure - Best practices to build a bioimaging project starting from a user request' with Aastha Mathur from Euro-BioImaging. To receive the link, register here: tinyurl.com/msm6ts9b if you haven't done so already.
🔬👨💻📰 #SReD is out! Automated structural detection for #ImageJ & #FIJI, from nano to macro ✨🐘. No training data, no bias - texture analysis with GPU acceleration!⚡️ Brainchild of @afonsomendes92.bsky.social and adventure w @christlet.bsky.social lab + friends. Check: www.nature.com/articles/s41...
I hope US folks on the No Kings rallies know how much people outside the US are heartened to see them. We always knew the US is full of very fine people who totally reject and revile what's happening, but my god it's good to see it.
🚨New pre-print out now!🚨 We 3D printed a large optical element that enhanced the illumination, contrast & image quality in transmission stereomicroscopy. This simple addition to the illumination path lets us detect refractive structures & dynamics unobserved by conventional stereomicroscopy. (1/5)
A large 3D-printed integrated lens-biprism element enhances contrast in transmission stereomicroscopy https://www.biorxiv.org/content/10.1101/2025.05.20.655140v1
What's the stupidest way you've hurt yourself? Oh I'm so glad you asked! I knocked myself out with a frozen bag of omelettes.
Bemused that in 2025, following a global pandemic not all that long ago, I have to send a team email telling people to stay home if they’re ill 😐
🌍 The 2nd #Imaging4All call is OPEN 🎉 Researchers in LMICs can apply for fully funded visits to access imaging technologies & training worldwide. 🔗 Info: www.globalbioimaging.org/i4a 🧪 Questions? i4a_support@embl.de 🔬 Imaging facilities—please share & host a grantee!
💡A must-read: how can we ensure microscopy tools are used, not just shipped, in underserved regions? Brilliant insights in this new Nature Methods Comment. 🔗https://www.nature.com/articles/s41592-025-02690-7 #Microscopy #ScienceEquity
We’re at the UCT Multi Institute Symposium today ✨ So much fun chatting with old and new colleagues from across the four institutes. Love getting people excited about microscopy and chatting about potential collaborations! 🔬🧫🧠🦠🫀🫁
Oh the excitement- It’s finally here! (I know, it’s not a microscope, but it took a disproportionate amount of paper work to get this here, so it’s worth celebrating) 🎉
Need help with image analysis? Now's your chance, with the upcoming Free Help event from Globias! Find out more and register with the link below👇
Second round of hashtag#GloBIAS Free Help (previously Call4Help) is happening in May. You can register for the sessions on our webpage: www.globias.org/activities/g... Registration deadline is 7. May 2025.
We're very excited to be working more closely with @globalbioimaging.bsky.social to bring #microscopy communities together! 🔬🤝😀 Find out more: www.rms.org.uk/resource/rms... @bioimaginguk.bsky.social @yorkbioimaging.bsky.social @rmsearlycareer.bsky.social @eurobioimaging.bsky.social
Second round of hashtag#GloBIAS Free Help (previously Call4Help) is happening in May. You can register for the sessions on our webpage: www.globias.org/activities/g... Registration deadline is 7. May 2025.
🚨🔬💗Whether investigating cell organelles or mapping proteins, together with Victor Puelles's lab we lay a roadmap for selecting optimal #ExM and #SuperResolution #microscopy combinations. Daria Aristova and Dominik Kylies review with amazing co-authors pubs.aip.org/aip/apr/arti...
It’s been a great experience spending time at @crick.ac.uk and @calm-stp.bsky.social. Thanks to the Crick-Africa Network for the support and opportunity, and to the CALM team for being such great hosts!
@caronjacobs.bsky.social is a Crick African Network fellow from the IDM microscopy platform at U Cape Town (@uctidm-mu.bsky.social). CAN aims to increase research capacity in Africa and we are excited to support Caron in building a world-class microscopy unit in one of Africa’s oldest universities.
The latest AIC Call for Proposals is now open! Deadline is June 16, 2025. Come use @hhmijanelia.bsky.social imaging technology and expertise for FREE. Visit www.aicjanelia.org/apply for details. Before applying, contact us to schedule a technical consultation!
Apply | aicjanelia
Apply to use the advanced microscopes housed at the AIC.
aicjanelia.org
A gentle reminder that the deadline for registration is today. The workshop is virtual and free of charge. #Bioimage #Analysis #Microscopy #Euro-Bioimaging #PSF
Join us for ALMU's upcoming virtual workshop on True Image Deconvolution, Restoration, and Analysis run by Scientific Volume Imaging @svi.nl and hosted by the Teaching and Academic Office @crg.eu ! For more information scan the QR code 👇 #Bioimage #Analysis #Microscopy #Euro-Bioimaging
Join us for ALMU's upcoming virtual workshop on True Image Deconvolution, Restoration, and Analysis run by Scientific Volume Imaging @svi.nl and hosted by the Teaching and Academic Office @crg.eu ! For more information scan the QR code 👇 #Bioimage #Analysis #Microscopy #Euro-Bioimaging
Please reshare to help this reach candidates and help me find a post-doc for this cool project! health.uct.ac.za/idm-imaging/...
Post doctoral fellowship available in the IDM-µ
We have an exciting post-doctoral fellowship position available in the IDM Microscopy Platform to work on the development of mobile microscopy sol
health.uct.ac.za
Boosting again: Post doc opportunity available in the IDM Microscopy Platform here at UCT! 🇿🇦 Come help build modular mobile microscopes for cell, tissue and pathogen imaging in remote settings in Africa 🧫🔬🌍 bit.ly/3QH3bMG
Boosting again: Post doc opportunity available in the IDM Microscopy Platform here at UCT! 🇿🇦 Come help build modular mobile microscopes for cell, tissue and pathogen imaging in remote settings in Africa 🧫🔬🌍 bit.ly/3QH3bMG
Applications for our Future Leaders in Biomedical Sciences scholarships are now open. These scholarships are aimed at students of Black or mixed Black heritage who wish to undertake a PhD in biological or biomedical sciences. Learn more and apply. ⬇️ www.crick.ac.uk/careers-and-...
Future Leaders in Biomedical Sciences Scholarships
Open to candidates of Black or mixed Black heritage only.
crick.ac.uk
We’re recruiting a post-doc! Join me in the IDM Microscopy Platform at UCT, and work on developing mobile microscopy solutions for diverse bioimaging applications and resource-limited settings.
🚨🍄🥼Delighted to share the registration page for our Mycology Bioimaging Workshop on "Imaging the Fungal Cell" W/ pre-AMI Fundamentals workshop @caronjacobs.bsky.social 🗓️ July 28 - Aug 7 2025 🌍 @AMI_microscopy Cape Town, SA 🥼 Hands-on 🔬 Pls RT & Apply here: sites.google.com/view/mycolog...
MBI
Dates: July 28 - August 1, 2025 Introduction to Principles of Microscopy August 4 - 7th, 2025 Advanced Imaging Approaches for Fungal Pathogens Location: University of Cape Town, South Africa Venue:...
sites.google.com
An open letter to the President of the @royalsociety.org – time to stand up for your values. occamstypewriter.org/scurry/2025/...
An open letter to the President of the Royal Society – time to stand up for your values | Reciprocal Space
occamstypewriter.org
I put together a small guide on how to get started with Fiji. Please distribute to anyone who might benefit form this! zenodo.org/records/1477... #imageanalysis #fiji #imagej #training
Image handling using Fiji - training materials
Description:This training package provides a guide to image processing and analysis using ImageJ/Fiji, an open-source software widely used in biological and medical imaging. The manual includes step-b...
zenodo.org
And that’s a wrap! Merci à tous! Those who joined us in person & online, CSRS in Abidjan for the hosting support & @cziscience.bsky.social for the funding to make the meeting possible! We’re leaving #ABIC_CM2024 inspired and energised for the future of bioimaging & community in Africa! 🔬🌍🇨🇮🙌
An exciting panel discussion with Umar Muhammad Kundi, Prof Zoueu, @globalbioimaging.bsky.social, Latin America Bioimaging, and @france-bioimaging.bsky.social highlighted the importance of story telling, scientific excellence & community for infrastructure advocacy #ABIC_CM2024
Precious Kgomo gave an update on our African Microscopy Infrastructure and Expertise survey, the interesting insights learned from the data, and challenges faced through the process #ABIC_CM2024