John Steele

@jfcsteele.bsky.social

Structural biologist and biochemist with an interest in synthetic biology for green chemistry. Unapologetic geek passionate about science and biotechnology. Postdoc at Edinburgh University- all views are my own. He/Him.

New paper from our lab, led by @jfcsteele.bsky.social and @biowacko.bsky.social! Here we screen natural enzyme variants with genetic and process optimizations to produce an efficient system to convert lignin-derived waste (guaiacol) into nylon precursor, adipic acid. pubs.acs.org/doi/full/10....

Heterologous Rieske Nonheme Iron Monooxygenases Enable Efficient Microbial Conversion of Lignin Guaiacol to Adipic Acid

Adipic acid (1,6-hexanedioic acid) is a key building block for nylon-6,6, a widely used polymer in the global chemical industry. Current industrial production relies on petrochemical feedstocks and nitric acid oxidation of cyclohexane/cyclohexanol mixtures, releasing nitrous oxide, a potent greenhouse gas. Biotechnological routes offer sustainable alternatives but have been limited by low yields or reliance on multistrain systems. Here we report a one-pot, single-strain microbial process for the efficient conversion of guaiacol─a lignin-derived aromatic─into adipic acid. By integrating heterologous Rieske nonheme iron monooxygenases from Cupriavidus necator N-1 with systematic process optimizations in engineered Escherichia coli, we achieve near-quantitative conversion with 97% yield and titers of 1.5 g/L in aqueous, lab-scale reactions. This work demonstrates a novel and efficient strategy for lignin valorization through engineered microbial synthesis, providing a new sustainable and scalable route to adipic acid.

pubs.acs.org

It's hard to describe how valuable CASP is to the structural biology & structure prediction field. The ever increasing number of prediction algorithms means independent assessment of their accuracy is vital. Please contribute interesting/tricky structural data if you can!

Torsten Schwede@torstenschwede.bsky.social · 5mo ago

Is #AI hitting a plateau in structure prediction? Help us find out at CASP17! 🧪🧬 Calling for Targets: Immune Complexes, protein - ligand complexes, RNA/DNA, conformational ensembles, membrane proteins, viral origins, and large complexes. The Rule of Thumb: If AF3 can’t model it, we want it.

The Critical Assessment of Structure Prediction (CASP) experiment is calling for prediction targets: Immune Complexes, Organic Ligand-Protein Complexes, Nucleic Acids and Complexes, Conformational Ensembles, Difficult Protein Structures and Complexes. 
Rule of Thumb: If AlphaFold3 can generate a high-quality model, it is likely not a CASP-grade challenge. If it struggles, we want it.

It feels cheesy when people say this but it really was a privilege to be part of this work. Our recent paper (led by the fantastic Ben Royer @swallacelab.bsky.social) shows how engineered Ecoli can turn the main product of PET plastic breakdown it into an anti-Parkinsons drug (L-DOPA) rdcu.be/e84ZO

Microbial upcycling of plastic waste to levodopa

Nature Sustainability - The production of high-value chemicals can involve energy-intensive processes, necessitating sustainable production strategies. Here the authors present a circular...

rdcu.be

Please spread the word: the Structural Studies Division @mrclmb.bsky.social is looking for a new tenure-track, independent group leader with an exciting plan in any area of Structural (Molecular & Cell) biology, in discovery biology and/or methods development. 🥳 mrc.tal.net/vx/mobile-0/...

Research Group Leader Tenure Track - Structural Studies - LMB 2775 - Medical Research Council

Location: Cambridge. Vacancy: Research Group Leader Tenure Track - Structural Studies - LMB 2775. Closing Date: 16/03/2026, 23:55

mrc.tal.net

There's a lot of discussion whether economic growth & carbon emissions can be decoupled. Some critics say countries (e.g UK) reduce emissions while growing by offshoring pollution (i.e. to China). This is a fantastic rebuttal- China continues to grow economically with reduced CO2 emissions.

Simon Evans@drsimevans.carbonbrief.org · 6mo ago

NEW ANALYSIS: China's CO2 has now been 'flat or falling' for 21 months * Down in 2025 * Still below Mar 2024 * Clean energy wave a key factor If this is China's peak (TBC) it's the climate story of the century so far… www.carbonbrief.org/...

@kurzgesagt.org have some fantastic videos. This could be a great opportunity and comes at a time when having accurate and trustworthy information is more vital than ever!

Elisa Granato@prokaryota.bsky.social · 7mo ago

JOB ALERT! 📢 For the scientists who love science communication: we’re hiring at @kurzgesagt.org !🌍 Come join our team, the vibes are impeccable. ✍️ Scriptwriter (Remote) kurzgesagt.org/careers/scri... 🔍 Fact-Checker & Researcher (Munich/Berlin/Remote) kurzgesagt.org/careers/seni...

Interested in parasitology? Looking to do a PhD? Cone join me and @geordieparasit.bsky.social in Edinburgh as we try and work out how human parasites get their vitamins.

The Geordie Parasitologist@geordieparasit.bsky.social · 9mo ago

🎓 Funded #PhD studentships in pathogen biology and parasitology *Cell and Molecular Biology*; *Host-pathogen interactions* Part of the EastBio Doctoral Landscape Award Based in the Edinburgh area of Scotland PhD 1: bit.ly/Host-pathoge... PhD 2: bit.ly/Parasite-sca... @uoe-eid.bsky.social

Check out this advertised professorship in Bern with my colleagues at the Institute of Plant Sciences! Please share widely to reach candidates from across the world and beyond our local academic bubbles. 🫧 #QueerInSTEM #DisabledInSTEM #BlackInSTEM #WomenInSTEM #CarersInSTEM #AcademicSky #HigherED

Michael Raissig@michaelraissig.bsky.social · 9mo ago

🌿🌱 We’re hiring a tenure-track Assistant Professor (potentially open rank) at the Institute of Plant Sciences @unibe.ch in Plant Population Ecology 🌻🌳 Be our colleague and join us in beautiful Bern, Switzerland Apply by Jan 23 2026 👉 ohws.prospective.ch/public/v1/jo...

The Wallace Lab is expanding in 2026, with five new Postdoctoral Research Associate positions now open. If you're passionate about engineering biology for sustainability, we'd love to hear from you! 🧬 ♻️ Deadline: 12th November 2025, details below ⬇️

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Very excited to announce that our collaborative manifesto for 🌱 #PlantScience #Education has now been published! Educators from >10 countries and 30 institutions have contributed to it and we are incredibly proud of the final output. Here is a short thread 🧵1/4 doi.org/10.1002/ppp3...

A manifesto for plant science education

Plants provide oxygen, food, shelter, medicines and environmental services, without which human society could not exist. Tackling pressing and global challenges requires well-trained plant scientists....

doi.org

Shortlisted candidates will be invited to give a seminar at the Fellows Conference, which will be held on 10 March 2026. Candidates who win Fellowships will be offered a Tenure Track Group Leader position from the outset, initially for 5 years. Find out more: www.jic.ac.uk/training-car...

Independent Research Fellowships Leading to Tenured Faculty Positions | John Innes Centre

The John Innes Centre (JIC), is a world leading centre of excellence in plant and microbial sciences based on the Norwich Research Park, UK. We are inviting applications from outstanding researchers…

jic.ac.uk

The proliferation of tools to generate predictive protein structures just underscores how important CASP is. There is no better way to allow unbiased & fair comparisons between tools! predictioncenter.org/index.cgi Such a shame NIH didn't renew funding

Home - Prediction Center

predictioncenter.org

Stephen Turner@stephenturner.us · 10mo ago

Apple is entering the protein folding arena. SimpleFold: Folding Proteins is Simpler than You Think arxiv.org/abs/2509.18480 🧬🖥️🧪 github.com/apple/ml-sim...