Gautam Dey

@gautamdey.bsky.social

Evolutionary cell biology @EMBL evonuclab.org

This epic paper, which has been a heroic 10 year journey for the lead author, Ricardo Barrientos, is finally out in Cell today! Many thanks to all co-authors, especially Billie Meadowcroft and Andela Saric for their beautiful MD simulations www.cell.com/cell/fulltex...

Basement membrane turnover controls cell shape

Basement membranes are scaffolds of proteins, like collagen, that give organs shape. During development, basement membranes must adapt to the growing organ. We infer how fast the basement membrane ada...

cell.com

Jana combines evolutionary genomics, quantitative cell biology and experimental evolution with exceptional creativity to tackle big questions in cellular evolution. It has been a privilege & a joy to have her in the lab these years - I can’t wait to see what she does next in her wonderful new home

Jana Helsen@helsenjana.bsky.social · 3w ago

I am starting my lab at the University of Geneva next January! Incredibly excited to soon be joining the MOCEL department as an Asst. Professor. The lab will use evolutionary cell biology to study chromosomes, centromeres & speciation 🧬🔬🌱 Intrigued, want to join or collaborate? 🔗 helsenlab.org

In September we will have the pleasure of hosting Karla and @fmikus.bsky.social from the labs of @dudinlab.bsky.social and @gautamdey.bsky.social. If you are around Granada please join us for their talk! They will present ExÂME, an incredible initiative to build a 3D atlas of protists diversity!

Facultad de Ciencias@fcienciasugr.bsky.social · 4w ago

🔬 Seminario: Microscopía de expansión: una nueva perspectiva sobre la diversidad de la vida 🗓️ 8 de sep ⏰ 11:00 am. 📍 Salón de Grados @fcienciasugr.bsky.social 🗣️ Dra. Karla Azucena Juárez y Dr. Félix Mikus 🔗 fciencias.ugr.es/facultad/not...

More than a decade since CRISPR-Cas9 knock in came on the scene, it's remained underutilized in emerging models. Using transposase, and a split-FP system, we built an optimized knock in system for use in the genetically-enabled urchin, Lytechinus pictus. bit.ly/4wswLsd

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@zjmaggiexu.bsky.social's story on suctorian trap structure adaptation is now online in @currentbiology.bsky.social , with new evolutionary analyses and modeling! This fall, Maggie will keep exploring predatory protists as a PD in @nbellono.bsky.social group; keep an eye out for her she's amazing!

sciencedirect.com

Scott Coyle@cellraiser.bsky.social · 9mo ago

How do cells adapt morphology to function? In a 🔥 preprint by @zjmaggiexu.bsky.social , with @dudinlab.bsky.social and @amyweeks.bsky.social , we identify a self-organizing single-cell morphology circuit that optimizes the feeding trap structure of the suctorian P. collini. 🧵 tinyurl.com/4k8nv926

I know it seems like a heretical idea, but one way to figure out if a preprint is really interesting (to you) is... to read the preprint. Then, in the spirit of sharing, send a note to authors: a simple kudos or a more detailed question. I do this a dozen times a year. It's awesome. Try it.

Expansion microscopy is revolutionary but application to actin cytoskeleton has been challenging. Not anymore....we combine IntAct + U-ExM to get an unprecedented 3D nanoscale view of actin isoforms in expanded cells. Read the full revised paper here: plos.io/4vansgr

IntAct-U-ExM enables super-resolution imaging of isoform-specific actin networks across species

A previous study in PLOS Biology developed IntAct, a tool to study isoform-specific actin localization, dynamics and molecular interactions across species. In this Update Article, IntAct is coupled wi...

plos.io

Saravanan Palani@syncellbiolab.bsky.social · 2mo ago

Our new paper in @plosbiology.org introduces IntAct-U-ExM enabling isoform-specific imaging of actin at nanoscale across yeast, mammalian cells & primary neurons. Fabulous work spearheaded by @anubhavdhar.bsky.social along with an amazing team! #actin #U-ExM journals.plos.org/plosbiology/...

Our latest: Minimal essential requirements for neural tube self-organisation How does a single cell give rise to a tissue with the right cell types in the right proportions? We deconstruct and rebuild a self-organising tissue from first principles A thread🧵 www.biorxiv.org/content/10.6...

Minimal essential requirements for neural tube self-organisation

The reliable generation of diverse cell types in precise proportions is essential for the formation of functional tissues during embryonic development. Three-dimensional organoid models derived from p...

biorxiv.org

🤩🎉 Huge congratulations to @gautamdey.bsky.social & @dudinlab.bsky.social Amazing science & a beautiful example of how to achieve this together with creativity, generosity, and real intellectual partnership. So happy for you both & for all of us inspired by you! 🎉 Kudos @embo.org for this choice.

EMBO@embo.org · 2mo ago

Congratulations to Gautam Dey (EMBL) and Omaya Dudin (University of Geneva) for being awarded the EMBO Gold Medal 2026 in recognition of their outstanding contributions to the #LifeSciences in Europe! 🧪 https://www.embo.org/press-releases/embo-gold-medal-2026-awarded-to-gautam-dey-and-omaya-dudin/

Two great scientists and humans, whose collaboration shows what it’s like to do science as a positive-sum game. Wonderful news for evolutionary cell biology and for you two @dudinlab.bsky.social @gautamdey.bsky.social! 👏

EMBO@embo.org · 2mo ago

Congratulations to Gautam Dey (EMBL) and Omaya Dudin (University of Geneva) for being awarded the EMBO Gold Medal 2026 in recognition of their outstanding contributions to the #LifeSciences in Europe! 🧪 https://www.embo.org/press-releases/embo-gold-medal-2026-awarded-to-gautam-dey-and-omaya-dudin/