Soile Nymark

@snymark.bsky.social

Retina-RPE geek and research group leader at Tampere University, Finland

When brain talks back to the eye "The state of our brain shapes what we see, but how early in the visual system does this start? A new study in PLOS Biology shows that brain state-dependent release of histamine modulates the very first stage of vision in the retina" journals.plos.org/plosbiology/...

When the brain talks back to the eye

The state of our brain shapes what we see, but how early in the visual system does this start? This Primer explores a new PLOS Biology study which shows that brain state-dependent release of histamine...

journals.plos.org

Our latest paper is out! While the circadian photoentrainment circuit has been extensively studied, the mechanisms regulating its development remain poorly understood. Here we show that retinal Müller glia play a key role in this process. Check it out! www.sciencedirect.com/science/arti...

Retinal glia regulate development of the circadian photoentrainment circuit

Circadian photoentrainment depends on intrinsically photosensitive retinal ganglion cells (ipRGCs), which convey environmental light information to th…

sciencedirect.com

Science and our wider society is advanced through the practice of basic science. Basic science is the engine that makes it all work. Janni changed the world through her work in fruit fly embryonic development that taught us about evolution, transcription and cell fate during development.

Albert and Mary Lasker Foundation@laskerfdn.bsky.social · 10mo ago

Happy birthday to #LaskerLaureate Christiane Nüsslein-Volhard! She identified 120 genes involved in specifying embryonic pattern development. Read about the epic screen that yielded her Lasker Award-winning results: ow.ly/Pz2050PYFsz #WomenInSTEM 🧪

Kun on tässä seurannut tutkimusrahoitukseen liittyvää ns. keskustelua, niin ei voi välttyä ajatukselta, että olemme menossa kohti ankeita aikoja. Ymmärrys rahoituksen roolista tutkimukselle, korkeakoulutukselle ja maan tulevaisuudelle on monilta täysin hukassa. Pieni ketju aiheesta. 1/18

Come to the second edition of the world wide sodium channel conference! Submit an abstract by September 26.

Oksana Iamshanova@iamshanovao.bsky.social · 11mo ago

2nd #WSCC26 will take place in Grindelwald (Switzerland) 🚠 from 4th to 6th of February, 2026. 🌍 Join @lampertlab.bsky.social , @antoniospantazis.bsky.social, @khannalabuf.bsky.social, and others. 💡 Submit abstracts by the 26th of September, 2025: lnkd.in/eDhPUVKd 💻 More info: lnkd.in/eJw9pfMz

Viisautta ja sivistystä huokuu tästä synttärihaastattelusta. Seppo Lindblom puolustaa velanhoidon ja puolustuksen pinteeseen jäänyttä hyvinvointia. Ja tutkimusta! Paras on silti tämä: ”-Mitä sanoisit 20-vuotiaalle itsellesi? -En kaksikymppisenä kuuntelisi näin vanhojen miesten neuvoja.”

90-vuotias | Seppo Lindblom tietää, miten talous saadaan kasvuun: satsaamalla tieteeseen ja tutkimukseen

”Vahva tiedepolitiikka on ainoa tepsivä tuottavuustemppu, joka lopulta auttaa velka- ja puolustuskuluissa”, Seppo Lindblom sanoo.

hs.fi

Awesome work by @gregdfield.bsky.social et al. www.biorxiv.org/content/10.1... Projection Targeting with Phototagging to Study the Structure and Function of Retinal Ganglion Cells | bioRxiv

Projection Targeting with Phototagging to Study the Structure and Function of Retinal Ganglion Cells

Visual information from the retina is sent to diverse targets throughout the brain by different retinal ganglion cells (RGCs). Much of our knowledge about the different RGC types and how they are routed to these brain targets is based on mice, largely due to the extensive library of genetically modified mouse lines. To alleviate the need for using genetically modified animal models for studying retinal projections, we developed a high-throughput approach called projection targeting with phototagging that combines retrograde viral labeling, optogenetic identification, functional characterization using multi-electrode arrays, and morphological analysis. This method enables the simultaneous investigation of projections, physiology, and structure-function relationships across dozens to hundreds of cells in a single experiment. We validated this method in rats by targeting RGCs projecting to the superior colliculus, revealing multiple functionally defined cell types that align with prior studies in mice. By integrating established techniques into a scalable workflow, this framework enables comparative investigations of visual circuits across species, expanding beyond genetically tractable models. Motivation Visual information from the retina is distributed to diverse targets throughout the brain. Much of our knowledge about how visual information is processed and routed to these brain targets is based on mice because of the large library of genetically modified mouse lines. For most other species, such libraries are not available. Therefore, we were motivated to develop an approach for characterizing diverse retinal projections into the brain that can be applied to other species. We aimed to achieve projection targeting with retrograde viral vectors, followed by identification of circuit-specific retinal ganglion cells (RGCs) with optogenetics, functional characterization with multi-electrode array (MEA) recordings, and morphological description with in situ and confocal microscopy. The resulting high-throughput approach permits functional and morphological investigation of dozens to hundreds of cells in individual experiments. By replacing the need for genetically modified animals with a suite of standard techniques, this approach should improve cross-species comparisons of the initial stages of visual processing. Summary Understanding the structure-function relationships across neurons is challenging, particularly when circuits are composed of dozens of distinct cell types. We refined an approach, called projection targeting with phototagging, that allows simultaneous elucidation of the projections, morphology, and visual response properties of diverse RGC types in the mammalian retina. The approach combines retrograde virally mediated phototagging of RGCs, microscopy, and large-scale MEA measurements. Importantly, the approach does not rely on transgenic animals and thus is generalizable across species. We validated this approach in rats by targeting retinal projections to the superior colliculus (SC). We showed that multiple RGC types project to the SC and that these results in rats align well with prior findings from transgenic mouse studies. ![Figure][1]</img> Highlights ### Competing Interest Statement K.R. Is a coauthor on a patent for AAV2retro (Application No. 62/350,361 filed June 15, 2016, and U.S. Application No. 62/404,585 filed October 5, 2016). * AAV : adeno-associated virus cMRF : central mesencephalic reticular formation CRF : contrast response functions DpG : deep gray layer of the superior colliculus DpWh : deep white layer of the superior colliculus EI : electrical image GCL : ganglion cell layer IC : inferior colliculus INL : inner nuclear layer InG : intermediate gray layer of the superior colliculus IPL : Inner Plexiform Layer InWh : intermediate white layer of the superior colliculus ISI : inter-spike interval distribution MEA : multi-electrode array MGN : medial geniculate nucleus of the thalamus OT : nucleus of the optic tract Op : optic nerve layer of the superior colliculus OSI : orientation-selective index PAG : periaqueductal gray PC : posterior commissure POD : post-operative day PT : pretectum ReaChR : red-shifted channelrhodopsin RF : receptive field RGC : retinal ganglion cell SRF : spatial receptive field SuG : superficial gray layer of the superior colliculus TRF : temporal receptive field Zo : zonal layer of the superior colliculus Duke Institute for Brain Sciences (DIBS) Incubator Award NIH R01 EY034004 K99 EY032119 NIH P30 EY005722 Core Grant for Vision Research at Duke University NIH P30 EY000331 for Vision Research and an Unrestricted Grant from Research to Prevent Blindness at UCLA [1]: pending:yes

biorxiv.org

It’s incredibly hard to express what Professor Pete Coffey meant to so many of us. The Macular Society has written a beautiful tribute to Pete and I'm honoured to have contributed a few words. Thank you, my friend, for so many happy days. www.macularsociety.org/about/media/...

Tributes paid to pioneering eye researcher Professor Pete Coffey

Tributes have been paid to one of the world’s top eye researchers, Professor Pete Coffey, who has sadly passed away after a long illness.

macularsociety.org

Brittien tiedeministeri Patrick Vallance avaa Metascience-kokouksen Lontoossa valtavan inspiroivalla puheella tieteestä, sen roolista, tehtävistä ja mahdollisuuksista. ”We cannot make a new world with old tools.”

Auditorion lavalla Iso-Britannian tiedeministeri