Great talk last Friday at #CABDseminars by Pedro Ortega! Pedro told us about his past and future scientific projects. Pedro was hosted by Peter Askjaer. Thanks for coming @pedroorteg.bsky.social
Pedro Ortega
@pedroorteg.bsky.social
Postdoctoral researcher at @CABIMER. Former researcher at @UCIrvine and @unisevilla. Cellular Stress Signaling and PAR biology.
#CABDseminars "From DNA Damage to Translation Shutdown" by Pedro Ortega @pedroorteg.bsky.social , @cabimer.bsky.social 🗓️ July 17th ⏰12 pm 📍Rosalind Franklin Auditorium, CABD Hosted by Peter Askjaer
🚨🚨NEW PREPRINT ALERT!🚨🚨Proud to present our recent study, out now on bioRxiv, in which we reveal an RNA-dependent positive feedback loop that drives malignant ribosome biogenesis and tumour growth (1/15). 🔗 www.biorxiv.org/content/10.6...
🧬 Our new paper is out in @natsmb.nature.com! ATRX is one of the most mutated genes in cancer, and linked to the rare ATR-X syndrome. We ran genome-scale CRISPR screens to map how it protects the genome, and found it is doing two separate jobs... 🧵 (1/4) nature.com/articles/s41594-026-01827-2
Distinct ATRX functions cooperate with 9-1-1 and CST complexes to safeguard replication and telomere integrity - Nature Structural & Molecular Biology
Segura-Bayona et al. uncover genetically separable ATRX functions that independently safeguard telomeres and genome replication, revealing how CST and 9-1-1 pathways suppress accumulation of toxic sin...
nature.com
Very excited to announce the workshop "DNA–Protein Crosslinks: Mechanisms and Links to Rare Genetic Disorders", which will take place in Baeza (Spain) from 18–20 November 2026! www.unia.es/estudios-y-a...
🧬 New work showing that PARP1 trapping activates ATM-mediated NF-κB signaling independently of DNA replication during TOP1 blockade. Glad to have contributed to this study from @buissonlab.bsky.social @ucirvine.bsky.social doi.org/10.1093/nar/...
PARP1 trapping activates ATM-mediated NF-κB signaling independent of replication in response to TOP1 blockade
Abstract. The NF-κB signaling pathway is a key driver of inflammation and can be activated by many genotoxic stresses. Yet, the mechanisms by which differe
doi.org
Check out our new review article on intrinsically disordered #microproteins now out in @acs.org Biochemistry! pubs.acs.org/doi/10.1021/...
No Time to Fold: Intrinsically Disordered Microproteins in Action
Advances in genomics, proteomics, and bioinformatics have uncovered the existence of thousands of translated small open reading frames less than 100–150 codons in length that encode microproteins. In ...
pubs.acs.org
How does a DNA repair enzyme find a needle in a haystack? 🧬 Our latest paper in NAR, led by the one and only C-trap queen Kaitlin Dehart, uses single-molecule imaging to watch APE1 scan DNA and lock onto AP-sites. @lumicks.bsky.social academic.oup.com/nar/article/...
A dynamic search mechanism enables APE1 to identify AP-sites in DNA
Abstract. Apurinic/apyrimidinic (AP) sites are among the most frequent DNA lesions, arising thousands of times per cell each day. These lesions threaten ge
academic.oup.com
Happy to share our new review in @annualreviews.bsky.social on abasic sites and their impact on DNA replication written by @angelotaglialatela.bsky.social. www.annualreviews.org/content/jour...
Endogenous Sources of Abasic Sites and Implications for DNA Replication: Mechanisms of Fork Stalling and Recovery
Apurinic/apyrimidinic (AP) sites, also known as abasic sites, are among the most frequent DNA lesions, arising spontaneously or as intermediates in base excision repair. Their structural impediment to...
annualreviews.org
Dear all, please see link below for Milano et al, describing a role for BRCA2 (& BRCA1) in the maturation of nascent DNA strand gaps during DNA replication in the presence of PARP inhibitor. Congratulations Larissa and all ! authors.elsevier.com/a/1mtQe3vVUP...
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authors.elsevier.com
Excited to share our new review in Molecular Cell on replicative single-stranded DNA gaps and their role in genome instability and cancer therapy. #DNARepair #ReplicationStress #GenomeStability #CancerResearch #MolecularBiology #PARPinhibitors www.cell.com/molecular-ce...
Replicative gaps in DNA damage tolerance, genome instability, and cancer therapy
Replicative single-stranded DNA gaps arise when DNA synthesis proceeds past lesions or difficult-to-replicate regions. This review delineates the pathways that generate, stabilize, and process these i...
cell.com
Our lab is hiring! Please come join our lab in the department of @UCLRespiratory in @uclmedsci.bsky.social We have another fully funded postdoctoral position available, focusing on delineating the earliest stages of lung cancer development 🧪! Please apply using the link below: lnkd.in/gN4UK785
This link will take you to a page that’s not on LinkedIn
lnkd.in
We just published a short conceptual review together with @angela-taddei.bsky.social on the spatial controls of homology search in both bacteria and eukaryotes. We discuss an emerging framework for homology search in cells with two main phases. Check it out: authors.elsevier.com/c/1mjyh,LqAZ...
Glad to have contributed to this study from @thomasmartinez.bsky.social’s lab identifying a new microprotein, NISM, implicated in nucleolar integrity! 🎉 Check out the link below: 🔗 www.biorxiv.org/content/10.6...
biorxiv.org
🥳 🎉 New preprint from the lab is out! It's time to officially introduce the world to the Nucleolar Integrity and Stress Microprotein (NISM)! Check out the preprint in the link below
HDAC5-encoded Microprotein NISM Mediates Nucleolar Formation and Ribosomal RNA Synthesis https://www.biorxiv.org/content/10.64898/2026.02.21.707204v1
🧵 Thread: What happens when transcription isn’t properly shut off during mitosis? Our new preprint explores just that 👇 www.biorxiv.org/content/10.6...
How could a simple self-replicating system emerge at the origins of life? RNA polymerase ribozymes can replicate RNA, but existing ones are so large that their self-replication seems impossible. Could they be smaller? Excited to share our latest work in @science.org on a new small polymerase. 1/n
A small polymerase ribozyme that can synthesize itself and its complementary strand
The emergence of a chemical system capable of self-replication and evolution is a critical event in the origin of life. RNA polymerase ribozymes can replicate RNA, but their large size and structural ...
science.org
Happy to share the results from my PhD thesis, in which we uncovered a function for FANCD2 on maintaining fork stability upon re-replication, now out in Nat. Commun! 📖 Read the full story here: www.nature.com/articles/s41... Thanks to everyone who supported me along the way!
FANCD2 restrains fork progression and prevents fragility at early origins upon re-replication - Nature Communications
Re-replication is a driving force of tumorigenesis and genomic instability. Here, the authors show that upon re-replication, FANCD2 localizes at early origins to limit replisome progression, ssDNA gap...
nature.com
Excited to share our new Nature study! 🧬 We (sidrituruci.bsky.social et al) discovered that CFAP20 helps clear stalled RNAPII, preventing harmful clashes with DNA replication machinery. This protects cells from R-loops and genome instability. Full paper: www.nature.com/articles/s41...
Thrilled to share our latest work - now available in full in Nature Communications - led in my lab by @vcherdy.bsky.social, with key collaborative contributions from @nitikataneja.bsky.social . rdcu.be/eVrxX
Nucleoplasmic Lamin A/C controls replication fork restart upon stress by modulating local H3K9me3 and ADP-ribosylation levels
Nature Communications - Replication fork plasticity upon genotoxic stress is modulated by nuclear architectural components by elusive mechanisms. Here the authors implicate Lamin A/C – best...
rdcu.be
🚨 Exciting news! Our latest study is out in Nature Communications! We reveal how specific BRCA2 mutations can hijack transcriptional programs—beyond their role in DNA repair. 🔗 rdcu.be/eT1R9 #CancerResearch #BRCA2 #Genomics
A recurrent pathogenic BRCA2 truncating variant reveals a role for BRCA2-PCAF complex in modulating NF-κB-driven transcription - Nature Communications
Pathogenic BRCA2 truncating variants in heterozygosis drive distinct cancer-linked mechanisms. Here the authors show that one causes PARPi sensitivity and HR loss via haploinsufficiency, while another...
nature.com
Thrilled to share that my postdoc research is published today in @science.org! We found that DNA repair uses cohesin complexes to build new chromatin loops that guide the homology search and boost accurate repair! 1/n www.science.org/doi/10.1126/...
Cohesin drives chromatin scanning during the RAD51-mediated homology search
Cohesin folds genomes into chromatin loops, the roles of which are under debate. We found that double-strand breaks (DSBs) induce de novo formation of chromatin loops in human cells, with the loop bas...
science.org
Finally published! Our work on how the #CircadianClock controls DNA repair. This has direct implications for cancer treatment: #Chronotherapy. @CABIMER @UniSevilla rdcu.be/eSwxl
Circadian regulation of homologous recombination by cryptochrome1-mediated dampening of DNA end resection
Nature Communications - The study shows that DNA double-strand break repair follows a circadian rhythm: homologous recombination peaks in the morning and declines by evening. CRY1 regulates CCAR2...
rdcu.be
New manuscript from the lab on @cddpress " H263A and SCAN1/H493R mutant TDP1 block TOP1-induced Double-Strand Break Repair during gene transcription in quiescent cells and promote cell death". rdcu.be/eSxtG @ibis-investigacion.bsky.social @unisevilla.bsky.social
H263A and SCAN1/H493R mutant TDP1 block TOP1-induced double-strand break repair during gene transcription in quiescent cells and promote cell death
Cell Death & Disease - H263A and SCAN1/H493R mutant TDP1 block TOP1-induced double-strand break repair during gene transcription in quiescent cells and promote cell death
rdcu.be
💫NEW: Saur, Lesage et al. report that RNA:DNA hybrids arise at double-strand breaks in transcribed genes, independently of de novo recruitment of RNA polymerase II/III, as a result of DSB-induced transcriptional repression. @lablegube.bsky.social @cbitoulouse.bsky.social bit.ly/4kFWGr1
Transcriptional repression facilitates RNA:DNA hybrid accumulation at DNA double-strand breaks - Nature Cell Biology
Saur, Lesage et al. report that RNA:DNA hybrids arise at double-strand breaks in transcribed genes, independently of de novo recruitment of RNA polymerase II/III, as a result of DSB-induced transcript...
bit.ly
Excited to share our lab’s latest preprint! We identify DDIAS as a novel single-stranded DNA-binding component of the TOPBP1–CIP2A complex, which acts in a mitotic DNA damage response pathway to protect chromosome integrity. Short summary below, and read it here: www.biorxiv.org/content/10.1...
DDIAS is a single-stranded DNA-binding effector of the TOPBP1-CIP2A complex in mitosis
DNA double-strand breaks and unresolved DNA replication intermediates are particularly dangerous during mitosis. Paradoxically, cells inactivate canonical DNA repair mechanisms during chromosome segre...
biorxiv.org
New work from the lab! 🔬 We report that DDIAS is a new component of the mitotic CIP2A-TOPBP1 pathway of genome maintenance. 1/n www.biorxiv.org/content/10.1...
Mitotic single-stranded DNA suppression by DDIAS
Incomplete DNA replication and chromosome breakage during mitosis pose major threats to chromosome segregation. The CIP2A-TOPBP1 complex acts to mitigate this peril, but its exact role is not yet unde...
biorxiv.org
Happy to share new work from my lab by co-authors Peng and Lee-when BRCA1 is absent, RAD51 is busy authors.elsevier.com/sd/article/S...
Thrilled to share our latest work, just published in @nature.com ⬇ www.nature.com/articles/s41... We discovered that PARP inhibitors 💊 trigger histone eviction from the chromatin and this creates a hidden vulnerability in PARPi resistant tumors. 🧵 (1/8)
NASP modulates histone turnover to drive PARP inhibitor resistance - Nature
PARP inhibitor treatment triggers histone release from the chromatin in cancer cells; consequently, targeting the histone chaperone NASP renders cells vulnerable to PARP inhibition.
nature.com
New from us in @natrevmcb.nature.com -- @szmyd-radoslaw.bsky.social & @radoncdocgee.bsky.social explore how DNA repair actively shapes cancer cell fate following DNA damage, reframing repair as both a protective process & a driver of treatment response and cell death. www.nature.com/articles/s41...
DNA-repair-driven cell death compels us to rethink cancer therapies - Nature Reviews Molecular Cell Biology
Emerging evidence suggests that, following genotoxic therapy, it is the repair of DNA double-strand breaks, rather than the damage itself, that frequently drives cancer cell death.
nature.com